Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1461Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: oan:Oant_2937 transcriptional regulator, GntR family. (268 aa)    
Predicted Functional Partners:
Mnod_6398
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; iron dependent repressor; GntR domain protein; KEGG: mrd:Mrad2831_5092 GntR family transcriptional regulator.
  
     0.774
Mnod_5666
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: xau:Xaut_0010 GntR family transcriptional regulator.
  
     0.772
Mnod_3699
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: met:M446_4646 GntR family transcriptional regulator.
  
     0.767
Mnod_3745
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mrd:Mrad2831_0339 GntR family transcriptional regulator.
  
     0.764
Mnod_3277
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: met:M446_1334 GntR family transcriptional regulator.
  
     0.690
Mnod_1469
PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mrd:Mrad2831_4644 GntR domain-containing protein.
 
  
 0.671
Mnod_1460
PFAM: major facilitator superfamily MFS_1; KEGG: oan:Oant_2936 major facilitator superfamily MFS_1.
       0.497
Mnod_1459
KEGG: nth:Nther_2154 carboxyvinyl-carboxyphosphonate phosphorylmutase.
  
  
 0.451
Mnod_5025
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; KEGG: met:M446_4164 hypothetical protein.
  
     0.416
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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