Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_1480PFAM: OmpA/MotB domain protein; KEGG: met:M446_0701 hypothetical protein. (612 aa)    
Predicted Functional Partners:
Mnod_1481
KEGG: met:M446_0700 hypothetical protein.
       0.820
Mnod_4552
Porin; KEGG: met:M446_3063 porin.
  
 
 0.752
Mnod_0107
KEGG: met:M446_4743 TRAP-type uncharacterized transport system periplasmic component-like protein.
  
    0.700
Mnod_0519
KEGG: met:M446_2036 TRAP-type uncharacterized transport system periplasmic component-like protein.
  
    0.692
Mnod_3737
KEGG: mpo:Mpop_1316 hypothetical protein.
 
   
 0.679
Mnod_5537
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; KEGG: met:M446_5154 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.678
Mnod_1479
Porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
 
 
 0.670
Mnod_0182
PFAM: transcription activator effector binding; KEGG: met:M446_3657 transcription activator effector binding.
  
     0.661
Mnod_5195
KEGG: met:M446_4457 hypothetical protein.
  
     0.654
Mnod_6910
KEGG: met:M446_1567 hypothetical protein.
  
    0.648
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.