Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1507PFAM: extracellular solute-binding protein family 5; KEGG: met:M446_0671 extracellular solute-binding protein. (516 aa)    
Predicted Functional Partners:
Mnod_1509
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_0669 binding-protein-dependent transport systems inner membrane component.
 
 0.984
Mnod_1508
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_0670 binding-protein-dependent transport systems inner membrane component.
 
 
 0.979
Mnod_1510
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_0668 ABC transporter related; Belongs to the ABC transporter superfamily.
 
 
 0.883
Mnod_1511
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: met:M446_0667 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding.
 
     0.816
Mnod_0402
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_2208 binding-protein-dependent transport systems inner membrane component.
 
 0.757
Mnod_0401
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_2209 binding-protein-dependent transport systems inner membrane component.
 
 
 0.747
Mnod_3269
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_2703 binding-protein-dependent transport systems inner membrane component.
 
 
 0.731
Mnod_3268
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_2702 binding-protein-dependent transport systems inner membrane component.
 
 
 0.730
Mnod_1354
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_0890 binding-protein-dependent transport systems inner membrane component.
 
 
 0.713
Mnod_1355
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_0891 binding-protein-dependent transport systems inner membrane component.
 
 
 0.702
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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