Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Mnod_1549PFAM: amidohydrolase; Amidohydrolase 3; KEGG: met:M446_4676 amidohydrolase. (413 aa)    
Predicted Functional Partners:
hutH
TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; KEGG: met:M446_1653 histidine ammonia-lyase; Belongs to the PAL/histidase family.
  
  
 0.806
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.803
Mnod_1550
PFAM: regulatory protein TetR; KEGG: rru:Rru_A3418 TetR family transcriptional regulator.
 
     0.802
Mnod_1548
PFAM: Extracellular ligand-binding receptor; KEGG: azc:AZC_3000 ABC transport solute-binding protein.
 
     0.743
Mnod_1037
PFAM: N-formylglutamate amidohydrolase; KEGG: met:M446_1652 N-formylglutamate amidohydrolase.
  
  
 0.614
Mnod_5950
PFAM: N-formylglutamate amidohydrolase; KEGG: met:M446_5219 N-formylglutamate amidohydrolase.
  
  
 0.614
Mnod_1545
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_3003 ABC transport ATP-binding protein.
 
     0.496
Mnod_1547
PFAM: inner-membrane translocator; KEGG: azc:AZC_3001 ABC transport permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.492
Mnod_1215
Arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: met:M446_1825 arginase; Belongs to the arginase family.
  
  
 0.475
Mnod_7678
TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: met:M446_6964 agmatinase; Belongs to the arginase family.
  
  
 0.475
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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