Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1558PFAM: metallophosphoesterase; KEGG: met:M446_0614 metallophosphoesterase. (184 aa)    
Predicted Functional Partners:
Mnod_1493
PFAM: protein of unknown function DUF892; KEGG: met:M446_0688 hypothetical protein.
  
     0.602
Mnod_1557
PFAM: helix-turn-helix domain protein; KEGG: met:M446_0615 XRE family transcriptional regulator.
       0.527
Mnod_7554
KEGG: met:M446_6819 hypothetical protein.
  
     0.513
Mnod_7552
KEGG: met:M446_6821 hypothetical protein.
  
     0.437
Mnod_7555
KEGG: met:M446_6818 hypothetical protein.
  
     0.424
Mnod_5158
KEGG: met:M446_4495 hypothetical protein.
  
     0.417
Mnod_5275
KEGG: met:M446_3084 hypothetical protein.
  
     0.404
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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