STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_1569PFAM: Hemolysin-type calcium-binding region; KEGG: met:M446_3007 hemolysin-type calcium-binding region. (341 aa)    
Predicted Functional Partners:
Mnod_0556
KEGG: bid:Bind_3695 proprotein convertase P.
 
 0.880
Mnod_6876
PFAM: Hemolysin-type calcium-binding region; KEGG: ana:all0364 similar to prohormone convertase.
  
     0.771
Mnod_1957
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: met:M446_3819 HlyD family type I secretion membrane fusion protein.
 
  
 0.701
Mnod_1958
KEGG: met:M446_3820 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase.
 
  
 0.669
Mnod_2541
KEGG: met:M446_3317 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.
 
 
 0.606
Mnod_2542
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: met:M446_3318 HlyD family type I secretion membrane fusion protein.
 
  
 0.585
Mnod_0484
PFAM: Hemolysin-type calcium-binding region; glycerophosphoryl diester phosphodiesterase; metallophosphoesterase; KEGG: atc:AGR_L_909 hypothetical protein.
 
  
0.539
Mnod_2553
PFAM: Hemolysin-type calcium-binding region; KEGG: fre:Franean1_0382 hypothetical protein.
  
     0.522
Mnod_0406
PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: met:M446_0092 ABC transporter related.
 
  
 0.484
Mnod_0407
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_0091 ABC transporter related.
 
  
 0.479
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.