Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1591PFAM: protein of unknown function DUF1206; KEGG: met:M446_0539 hypothetical protein. (284 aa)    
Predicted Functional Partners:
Mnod_5352
KEGG: met:M446_5045 putative DNA topoisomerase I.
  
     0.548
Mnod_0154
PFAM: phosphoesterase PA-phosphatase related; KEGG: met:M446_4605 phosphoesterase PA-phosphatase related.
 
     0.485
Mnod_1723
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: met:M446_0415 pyridoxamine 5'-phosphate oxidase-related FMN-binding.
 
     0.476
Mnod_7147
PFAM: Luciferase-like monooxygenase; KEGG: met:M446_6346 luciferase family protein.
  
     0.454
Mnod_1062
PFAM: ribonuclease BN; KEGG: met:M446_1426 ribonuclease BN.
 
     0.453
Mnod_1815
TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: met:M446_5496 PfpI family intracellular peptidase.
  
     0.430
Mnod_3110
PFAM: ribonuclease BN; KEGG: met:M446_3778 ribonuclease BN.
 
     0.415
Mnod_0205
KEGG: met:M446_3789 hypothetical protein.
  
     0.412
Mnod_2923
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: met:M446_2670 molybdopterin dehydrogenase FAD-binding.
  
     0.401
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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