Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
Mnod_1629KEGG: met:M446_0471 hypothetical protein. (205 aa)    
Predicted Functional Partners:
Mnod_1630
Putative transcriptional regulator; SMART: regulatory protein ArsR; KEGG: met:M446_0470 hypothetical protein.
 
     0.945
Mnod_1631
Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
     0.700
Mnod_2803
PFAM: type IV pilus assembly PilZ; KEGG: met:M446_2410 type IV pilus assembly PilZ.
  
     0.637
Mnod_1085
PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: met:M446_2113 protein of unknown function DUF900 hydrolase family protein.
  
     0.545
Mnod_5558
KEGG: met:M446_5326 hypothetical protein.
  
     0.536
Mnod_7181
KEGG: met:M446_6312 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein.
  
     0.526
Mnod_1628
Hypothetical protein.
       0.511
Mnod_5034
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: met:M446_4177 redoxin domain-containing protein.
  
     0.490
Mnod_2808
KEGG: met:M446_2404 hypothetical protein.
  
     0.489
Mnod_6733
KEGG: met:M446_6519 hypothetical protein.
  
     0.487
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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