STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_1633PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bmj:BMULJ_04471 salicylate hydroxylase. (410 aa)    
Predicted Functional Partners:
Mnod_7505
PFAM: monooxygenase FAD-binding; KEGG: met:M446_6758 monooxygenase FAD-binding.
  
  
 
0.920
Mnod_0136
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: met:M446_2675 ferredoxin.
   
 
 0.910
acpP
Phosphopantetheine-binding; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
   0.697
Mnod_1242
PFAM: inner-membrane translocator; KEGG: met:M446_1977 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
   
    0.639
Mnod_1632
PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: ajs:Ajs_0448 IclR family transcriptional regulator.
 
   
 0.532
Mnod_1164
PFAM: Extracellular ligand-binding receptor; KEGG: met:M446_1798 extracellular ligand-binding receptor.
   
    0.447
Mnod_1241
PFAM: Extracellular ligand-binding receptor; KEGG: met:M446_1976 extracellular ligand-binding receptor.
   
    0.447
Mnod_3427
KEGG: bja:blr3183 ABC transporter substrate-binding protein.
   
    0.447
Mnod_4605
TIGRFAM: urea ABC transporter, urea binding protein; KEGG: met:M446_2620 putative UreA short-chain amide.
   
    0.447
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
 
 
 0.443
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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