Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1635PFAM: transferase hexapeptide repeat containing protein; KEGG: met:M446_0468 hexapaptide repeat-containing transferase. (177 aa)    
Predicted Functional Partners:
Mnod_2420
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; PFAM: ribulose bisphosphate carboxylase large chain; KEGG: xau:Xaut_2924 ribulose-bisphosphate carboxylase; Belongs to the RuBisCO large chain family.
    
 
 0.658
Mnod_3435
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; PFAM: ribulose bisphosphate carboxylase large chain; KEGG: met:M446_1732 ribulose-bisphosphate carboxylase; Belongs to the RuBisCO large chain family.
    
 
 0.658
acpP
Phosphopantetheine-binding; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
  
 0.506
Mnod_0692
TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: met:M446_1753 dihydroorotase, multifunctional complex type.
  
  
 0.473
Mnod_1487
PFAM: carbonic anhydrase; KEGG: met:M446_3323 carbonic anhydrase.
    
 
 0.473
Mnod_5764
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 
 0.473
Mnod_7305
PFAM: carbonic anhydrase; KEGG: azc:AZC_0918 carbonic anhydrase.
    
 
 0.473
Mnod_7378
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 
 0.473
Mnod_1633
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bmj:BMULJ_04471 salicylate hydroxylase.
       0.436
pyrC
Dihydroorotase, multifunctional complex type; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.
  
  
 0.436
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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