STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_1654PFAM: ABC-2 type transporter; KEGG: met:M446_3810 ABC-2 type transporter. (265 aa)    
Predicted Functional Partners:
Mnod_1659
PFAM: ABC transporter related; KEGG: met:M446_0434 ABC transporter related.
 
 0.999
Mnod_1658
KEGG: met:M446_6013 capsule polysaccharide export protein-like protein.
 
 
 0.989
Mnod_1852
PFAM: lipopolysaccharide biosynthesis protein; KEGG: met:M446_4871 capsule polysaccharide export protein-like protein.
 
 
 0.989
Mnod_2049
KEGG: met:M446_6013 capsule polysaccharide export protein-like protein.
 
 
 0.989
Mnod_1941
PFAM: Capsule polysaccharide biosynthesis protein; KEGG: met:M446_0321 capsule polysaccharide biosynthesis protein.
 
  
 0.968
Mnod_1938
PFAM: polysaccharide export protein; KEGG: met:M446_0324 polysaccharide export protein.
 
  
 0.917
Mnod_7135
PFAM: polysaccharide export protein; KEGG: met:M446_6357 polysaccharide export protein.
 
  
 0.916
Mnod_1939
PFAM: Capsule polysaccharide biosynthesis protein; KEGG: met:M446_0323 capsule polysaccharide biosynthesis protein.
 
   
 0.828
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
 
   
 0.813
Mnod_4882
Hypothetical protein; KEGG: acr:Acry_0615 glycosyl transferase, group 1.
 
  
 0.772
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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