STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_1668PFAM: CsbD family protein; KEGG: met:M446_0717 CsbD family protein; Belongs to the UPF0337 (CsbD) family. (57 aa)    
Predicted Functional Partners:
Mnod_1723
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: met:M446_0415 pyridoxamine 5'-phosphate oxidase-related FMN-binding.
  
    0.625
Mnod_0177
PFAM: protein of unknown function DUF1328; KEGG: met:M446_3661 hypothetical protein.
  
    0.605
Mnod_4397
PFAM: protein of unknown function DUF1328; KEGG: met:M446_2727 hypothetical protein.
  
    0.605
Mnod_6383
PFAM: protein of unknown function DUF1328; KEGG: met:M446_5876 hypothetical protein.
  
    0.605
Mnod_6133
PFAM: transport-associated; KEGG: mrd:Mrad2831_2622 transport-associated.
  
  
 0.567
Mnod_6174
PFAM: CBS domain containing protein; transport-associated; SMART: Transport-associated and nodulation region; KEGG: met:M446_3570 CBS domain-containing protein.
  
  
 0.552
Mnod_4402
KEGG: met:M446_2722 hypothetical protein.
  
  
 0.529
Mnod_3723
KEGG: met:M446_2548 hypothetical protein.
  
    0.522
Mnod_7554
KEGG: met:M446_6819 hypothetical protein.
 
    0.510
Mnod_1493
PFAM: protein of unknown function DUF892; KEGG: met:M446_0688 hypothetical protein.
 
  
 0.506
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.