Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1677PFAM: aminotransferase class I and II; KEGG: met:M446_4903 aminotransferase class I and II. (392 aa)    
Predicted Functional Partners:
Mnod_1676
KEGG: met:M446_4904 hypothetical protein.
       0.805
Mnod_1170
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: met:M446_1812 glutamate synthase (ferredoxin).
  
  
 0.594
Mnod_0511
PFAM: prephenate dehydratase; KEGG: met:M446_1620 prephenate dehydratase.
 
  
 0.549
Mnod_1675
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: met:M446_4905 dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
  
 0.488
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
 
 0.409
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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