Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1705PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: met:M446_4821 short-chain dehydrogenase/reductase SDR. (278 aa)    
Predicted Functional Partners:
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
       0.561
Mnod_2717
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pol:Bpro_3342 short-chain dehydrogenase/reductase SDR.
  
 
   0.557
Mnod_1706
KEGG: met:M446_4820 putative acyl-CoA dehydrogenase.
       0.497
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
  
 
 0.493
Mnod_0649
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_4178 short-chain dehydrogenase/reductase SDR.
  
 
   0.491
Mnod_0819
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bid:Bind_2090 short-chain dehydrogenase/reductase SDR.
  
 
   0.462
Mnod_4408
TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: met:M446_3414 haloacid dehalogenase, type II.
 
    0.461
Mnod_4302
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mrd:Mrad2831_6036 short-chain dehydrogenase/reductase SDR.
  
 
   0.446
Mnod_7160
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: met:M446_6333 short-chain dehydrogenase/reductase SDR.
  
 
   0.436
Mnod_1457
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: oan:Oant_2935 short-chain dehydrogenase/reductase SDR.
  
 
   0.431
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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