Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1708KEGG: met:M446_4814 phosphoribosyltransferase. (264 aa)    
Predicted Functional Partners:
Mnod_3313
TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: met:M446_4345 DNA protecting protein DprA.
 
 
 0.886
Mnod_1522
PFAM: ComEC/Rec2-related protein; KEGG: met:M446_0648 ComEC/Rec2-related protein.
 
  
 0.875
Mnod_6353
GAF sensor hybrid histidine kinase; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: met:M446_5171 GAF sensor hybrid histidine kinase.
  
  
 0.874
Mnod_5418
KEGG: met:M446_0209 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase.
 
  
 0.858
Mnod_5537
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; KEGG: met:M446_5154 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.799
Mnod_1600
TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: met:M446_0494 N-acetylglucosamine-6-phosphate deacetylase.
  
    0.755
Mnod_0374
PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: met:M446_2236 amine oxidase.
  
    0.751
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.742
gpt
Phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.
   
  
 0.742
Mnod_1659
PFAM: ABC transporter related; KEGG: met:M446_0434 ABC transporter related.
   
    0.736
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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