Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1734PFAM: aldo/keto reductase; KEGG: met:M446_0404 aldo/keto reductase. (328 aa)    
Predicted Functional Partners:
Mnod_3345
PFAM: aldo/keto reductase; KEGG: xac:XAC1212 oxidoreductase.
 
 
0.474
Mnod_1735
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_0403 LysR family transcriptional regulator.
       0.470
Mnod_7084
PFAM: aldo/keto reductase; KEGG: met:M446_6222 aldo/keto reductase.
 
 
 0.447
Mnod_6439
PFAM: aldo/keto reductase; KEGG: bja:bll6256 dehydrogenase.
 
 
0.443
Mnod_1733
TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: met:M446_0405 penicillin-binding protein 1C.
       0.401
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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