Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_1769PFAM: extracellular solute-binding protein family 5; KEGG: mrd:Mrad2831_3283 extracellular solute-binding protein. (589 aa)    
Predicted Functional Partners:
Mnod_0489
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_1691 alkaline phosphatase.
 
 0.975
Mnod_0488
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_1692 binding-protein-dependent transport systems inner membrane component.
 
 0.974
Mnod_0487
KEGG: met:M446_1693 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.962
Mnod_0486
KEGG: met:M446_1694 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.957
Mnod_0490
PFAM: extracellular solute-binding protein family 5; KEGG: met:M446_1690 extracellular solute-binding protein.
  
  
 
0.903
Mnod_1770
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mrd:Mrad2831_3284 integral membrane sensor signal transduction histidine kinase.
 
     0.736
Mnod_3655
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_2972 binding-protein-dependent transport systems inner membrane component.
 
 
 0.715
Mnod_6092
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_5344 binding-protein-dependent transport systems inner membrane component.
 
 
 0.698
Mnod_3654
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_2973 binding-protein-dependent transport systems inner membrane component.
 
 
 0.681
Mnod_3269
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_2703 binding-protein-dependent transport systems inner membrane component.
 
 
 0.677
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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