Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Mnod_1856TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: met:M446_4866 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (316 aa)    
Predicted Functional Partners:
Mnod_1858
PFAM: Fusaric acid resistance protein conserved region; KEGG: met:M446_4864 fusaric acid resistance protein region.
 
  
 0.974
Mnod_1859
PFAM: regulatory protein MarR; KEGG: met:M446_4863 MarR family transcriptional regulator.
 
  
 0.931
Mnod_1857
PFAM: protein of unknown function DUF1656; KEGG: met:M446_4865 hypothetical protein.
 
     0.922
Mnod_4154
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: met:M446_4418 RND efflux system outer membrane lipoprotein.
 
 
 0.815
Mnod_6495
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: met:M446_5878 TolC family type I secretion outer membrane protein.
 
 
 0.716
Mnod_0533
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:blr0276 hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.644
Mnod_6435
PFAM: major facilitator superfamily MFS_1; KEGG: gdi:GDI1614 putative transporter protein.
  
 
 0.537
Mnod_1855
PFAM: major facilitator superfamily MFS_1; KEGG: met:M446_4867 major facilitator transporter.
       0.513
Mnod_3015
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mrd:Mrad2831_0285 RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.508
Mnod_2981
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rle:RL1330 putative transmembrane efflux pump protein.
  
 
 0.507
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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