Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_2028KEGG: mex:Mext_1283 carbon monoxide dehydrogenase subunit G. (56 aa)    
Predicted Functional Partners:
Mnod_2025
PFAM: inner-membrane translocator; KEGG: mpo:Mpop_3556 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.678
Mnod_2026
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpo:Mpop_3555 ABC transporter related.
       0.678
Mnod_2027
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mpo:Mpop_3554 ABC transporter related.
       0.678
Mnod_2024
PFAM: inner-membrane translocator; KEGG: mpo:Mpop_3557 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.655
Mnod_2023
PFAM: Extracellular ligand-binding receptor; KEGG: mex:Mext_1288 extracellular ligand-binding receptor.
  
    0.586
Mnod_2022
PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mpo:Mpop_3559 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding.
 
  
 0.552
Mnod_2020
PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: mex:Mext_1291 molybdopterin dehydrogenase FAD-binding.
  
  
 0.514
Mnod_2021
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mpo:Mpop_3560 (2Fe-2S)-binding domain protein.
     
 0.487
Mnod_1748
PFAM: cyclase/dehydrase; carbon monoxide dehydrogenase subunit G; KEGG: met:M446_5438 carbon monoxide dehydrogenase subunit G.
  
     0.455
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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