Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_2060PFAM: inositol monophosphatase; KEGG: mrd:Mrad2831_5442 inositol monophosphatase. (300 aa)    
Predicted Functional Partners:
Mnod_4642
PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: met:M446_2585 myo-inositol-1-phosphate synthase.
  
 
 0.916
Mnod_0361
PFAM: inositol monophosphatase; KEGG: met:M446_2248 inositol monophosphatase.
     
  0.900
Mnod_4828
PFAM: inositol monophosphatase; KEGG: met:M446_2557 inositol-phosphate phosphatase.
     
  0.900
Mnod_7280
PFAM: inositol monophosphatase; KEGG: met:M446_6007 inositol-phosphate phosphatase.
     
  0.900
nusA
NusA antitermination factor; Participates in both transcription termination and antitermination.
   
   0.667
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
   0.627
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.625
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.613
nusB
NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
   
 
 0.501
Mnod_1653
PFAM: Glutathione S-transferase domain; KEGG: met:M446_0442 glutathione S-transferase domain-containing protein; Belongs to the GST superfamily.
  
  
 0.493
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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