STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2062KEGG: mex:Mext_2422 hypothetical protein. (418 aa)    
Predicted Functional Partners:
Mnod_2061
Glycosyltransferase; KEGG: mex:Mext_2423 glycosyltransferase.
    
0.761
Mnod_0494
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: met:M446_1684 endonuclease/exonuclease/phosphatase.
  
     0.715
Mnod_4882
Hypothetical protein; KEGG: acr:Acry_0615 glycosyl transferase, group 1.
 
  
 0.708
Mnod_3778
KEGG: mpo:Mpop_2350 hypothetical protein.
  
     0.680
Mnod_5460
KEGG: met:M446_0253 capsular polysaccharide biosynthesis protein-like protein.
  
     0.672
Mnod_6689
KEGG: met:M446_0253 capsular polysaccharide biosynthesis protein-like protein.
  
     0.620
Mnod_2750
KEGG: nar:Saro_3231 hypothetical protein.
 
    0.564
Mnod_6296
PFAM: glycosyl transferase family 2; KEGG: bra:BRADO7033 putative glycosyl transferase, group 2.
 
    0.516
Mnod_2744
KEGG: mmr:Mmar10_2480 hypothetical protein.
  
     0.492
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.491
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.