Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Mnod_2064KEGG: met:M446_3419 hypothetical protein. (132 aa)    
Predicted Functional Partners:
Mnod_1583
PFAM: DSBA oxidoreductase; KEGG: met:M446_2795 DsbA oxidoreductase.
  
  
 0.655
Mnod_2134
PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mrd:Mrad2831_2596 globin; Belongs to the globin family.
     
 0.509
Mnod_5676
PFAM: globin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: met:M446_2864 oxidoreductase FAD/NAD(P)-binding subunit; Belongs to the globin family.
     
 0.509
Mnod_6438
MOSC domain containing protein; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; 3-alpha domain protein; MOSC domain containing protein; Oxidoreductase FAD-binding domain protein; KEGG: rle:pRL110471 putative flavoprotein/ferredoxin.
 
   
 0.435
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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