Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2079PFAM: protein of unknown function DUF465; KEGG: met:M446_2690 hypothetical protein. (61 aa)    
Predicted Functional Partners:
Mnod_1839
PFAM: Invasion associated locus B family protein; KEGG: met:M446_4885 invasion associated locus B family protein.
  
     0.571
Mnod_5963
PFAM: protein of unknown function DUF1036; KEGG: met:M446_5206 hypothetical protein.
  
     0.541
Mnod_4557
PFAM: SCP-like extracellular; KEGG: met:M446_3058 SCP-like extracellular.
  
     0.509
Mnod_7506
KEGG: met:M446_6759 hypothetical protein.
  
     0.494
Mnod_7180
PFAM: Invasion associated locus B family protein; KEGG: met:M446_6313 invasion associated locus B family protein.
  
     0.493
Mnod_7087
PFAM: conserved hypothetical protein; KEGG: met:M446_6217 hypothetical protein.
  
     0.464
Mnod_2078
PFAM: protein of unknown function DUF465; KEGG: met:M446_2691 hypothetical protein.
       0.457
Mnod_7208
KEGG: met:M446_6292 hypothetical protein.
  
     0.455
Mnod_0278
PFAM: protein of unknown function DUF1007; KEGG: met:M446_2332 hypothetical protein.
  
     0.438
Mnod_4668
KEGG: met:M446_4778 hypothetical protein.
  
     0.430
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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