STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2085PFAM: protein of unknown function DUF849; KEGG: met:M446_1332 hypothetical protein. (281 aa)    
Predicted Functional Partners:
Mnod_2083
TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; Carboxymuconolactone decarboxylase; KEGG: met:M446_4655 3-oxoadipate enol-lactonase.
    
  0.937
Mnod_2813
TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; KEGG: met:M446_2398 beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
    
  0.901
Mnod_3361
TIGRFAM: acetyl-CoA acetyltransferase; beta-ketoadipyl CoA thiolase; PFAM: Thiolase; KEGG: xau:Xaut_0905 beta-ketoadipyl CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
    
  0.901
Mnod_5443
TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase; KEGG: met:M446_0235 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
    
  0.901
Mnod_2376
PFAM: protein of unknown function DUF849; KEGG: met:M446_1332 hypothetical protein.
  
  
 
0.900
Mnod_2086
TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: met:M446_4652 protocatechuate 3,4-dioxygenase, alpha subunit.
     
 0.710
Mnod_2087
TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: met:M446_4651 protocatechuate 3,4-dioxygenase, beta subunit.
     
 0.709
Mnod_2278
TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; KEGG: met:M446_1572 3-oxoacid CoA-transferase, B subunit.
    
 0.532
Mnod_6918
PFAM: Cupin 2 conserved barrel domain protein; KEGG: met:M446_6465 cupin 2 domain-containing protein.
  
    0.520
Mnod_2088
PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: met:M446_4650 IclR family transcriptional regulator.
  
    0.497
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.