Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_2114Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (293 aa)    
Predicted Functional Partners:
Mnod_2111
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; KEGG: met:M446_3270 cytochrome c oxidase, cbb3-type, subunit I; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
Mnod_2112
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: met:M446_3271 cytochrome c oxidase, cbb3-type, subunit II.
 
 0.999
Mnod_5230
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; KEGG: met:M446_3270 cytochrome c oxidase, cbb3-type, subunit I.
 
 
 0.985
Mnod_5231
TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: met:M446_3271 cytochrome c oxidase, cbb3-type, subunit II.
 
 
 0.985
Mnod_2113
PFAM: Cbb3-type cytochrome oxidase component; KEGG: met:M446_3272 Cbb3-type cytochrome oxidase component.
 
 
 0.966
Mnod_7537
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 0.962
Mnod_7461
TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: met:M446_6711 cytochrome c oxidase accessory protein CcoG.
 
  
 0.957
Mnod_7462
PFAM: FixH family protein; KEGG: met:M446_6712 FixH family protein.
 
 
 0.934
Mnod_2346
PFAM: cytochrome c class I; KEGG: met:M446_2992 cytochrome c class I.
  
  
 
0.927
Mnod_7536
Cytochrome b/b6 domain protein; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.889
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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