Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_2124PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: met:M446_5680 PpiC-type peptidyl-prolyl cis-trans isomerase. (277 aa)    
Predicted Functional Partners:
Mnod_2125
TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; KEGG: mrd:Mrad2831_2589 respiratory nitrate reductase, gamma subunit.
 
    0.926
Mnod_2126
TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: met:M446_5682 nitrate reductase molybdenum cofactor assembly chaperone.
 
    0.924
Mnod_2127
TIGRFAM: nitrate reductase, beta subunit; KEGG: mrd:Mrad2831_2591 nitrate reductase, beta subunit.
 
    0.901
Mnod_2128
TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mrd:Mrad2831_2592 nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
    0.857
Mnod_2123
KEGG: met:M446_5679 hypothetical protein.
       0.830
Mnod_2131
PFAM: major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_2594 major facilitator transporter.
 
  
 0.720
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
 
 0.630
bamA
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.592
Mnod_2121
TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: met:M446_5675 molybdenum cofactor synthesis domain-containing protein.
  
    0.557
Mnod_5389
Hypothetical protein; KEGG: nmu:Nmul_A1222 von Willebrand factor, type A.
   
 
 0.547
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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