Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_2128TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mrd:Mrad2831_2592 nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1250 aa)    
Predicted Functional Partners:
Mnod_2125
TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; KEGG: mrd:Mrad2831_2589 respiratory nitrate reductase, gamma subunit.
 
 0.999
Mnod_2127
TIGRFAM: nitrate reductase, beta subunit; KEGG: mrd:Mrad2831_2591 nitrate reductase, beta subunit.
 
 0.999
Mnod_2126
TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: met:M446_5682 nitrate reductase molybdenum cofactor assembly chaperone.
 
 
 0.996
Mnod_2131
PFAM: major facilitator superfamily MFS_1; KEGG: mrd:Mrad2831_2594 major facilitator transporter.
 
 
 0.995
Mnod_1700
PFAM: major facilitator superfamily MFS_1; KEGG: met:M446_4825 major facilitator transporter.
 
 
 0.993
Mnod_2868
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: met:M446_3746 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.974
Mnod_1090
KEGG: met:M446_2118 hypothetical protein.
  
 
 0.934
Mnod_1389
KEGG: met:M446_0863 hypothetical protein.
  
 
 0.934
Mnod_2865
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: met:M446_3749 nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
  
 
 0.918
Mnod_2867
TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: met:M446_3747 precorrin-3B synthase.
     
 0.913
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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