Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
Mnod_2171TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: met:M446_2468 iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. (108 aa)    
Predicted Functional Partners:
Mnod_0691
TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: met:M446_1754 folate-binding protein YgfZ.
 
 
 0.842
Mnod_2170
KEGG: met:M446_2467 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; Belongs to the dGTPase family. Type 2 subfamily.
     
 0.829
Mnod_7171
KEGG: met:M446_6321 NifU domain-containing protein.
  
 
 0.813
Mnod_2172
KEGG: met:M446_2469 hypothetical protein.
       0.800
Mnod_3988
PFAM: NifQ family protein; KEGG: met:M446_3543 NifQ family protein.
  
 
 0.800
Mnod_0643
PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: aba:Acid345_2275 aminotransferase, class V.
 
 
 0.780
Mnod_5849
PFAM: aminotransferase class V; KEGG: met:M446_5110 aminotransferase class V.
 
 
 0.771
Mnod_4909
PFAM: heat shock protein DnaJ domain protein; protein of unknown function DUF1332; KEGG: met:M446_4375 heat shock protein DnaJ domain-containing protein.
  
 
 0.748
Mnod_4429
Scaffold protein Nfu/NifU; PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: met:M446_3394 scaffold protein Nfu/NifU.
 
 
 0.733
Mnod_0011
TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: met:M446_0007 glutaredoxin-like protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.680
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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