Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2321PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mpo:Mpop_0117 protein of unknown function DUF395 YeeE/YedE. (152 aa)    
Predicted Functional Partners:
Mnod_2320
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mex:Mext_1143 protein of unknown function DUF395 YeeE/YedE.
 
     0.952
Mnod_6160
PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mex:Mext_1143 protein of unknown function DUF395 YeeE/YedE.
 
     0.798
Mnod_2319
KEGG: rpd:RPD_0363 regulatory protein, ArsR.
       0.773
Mnod_2318
KEGG: met:M446_0132 hypothetical protein.
       0.571
Mnod_7291
PFAM: SirA family protein; KEGG: met:M446_5996 SirA family protein; Belongs to the sulfur carrier protein TusA family.
  
  
 0.513
Mnod_2757
PFAM: beta-lactamase domain protein; KEGG: mpo:Mpop_0115 beta-lactamase domain protein.
 
     0.429
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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