STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2326Phasin; KEGG: met:M446_5741 phasin. (116 aa)    
Predicted Functional Partners:
Mnod_4557
PFAM: SCP-like extracellular; KEGG: met:M446_3058 SCP-like extracellular.
  
     0.767
Mnod_7568
KEGG: met:M446_6832 hypothetical protein.
  
     0.763
Mnod_0685
KEGG: met:M446_1756 hypothetical protein.
  
    0.757
Mnod_0955
PFAM: NUDIX hydrolase; KEGG: met:M446_1441 NUDIX hydrolase.
  
     0.746
Mnod_4533
KEGG: met:M446_3260 hypothetical protein.
  
     0.737
Mnod_6153
PFAM: regulatory protein TetR; KEGG: xau:Xaut_2539 TetR family transcriptional regulator.
  
     0.708
Mnod_4739
PFAM: protein of unknown function DUF1150; KEGG: met:M446_4229 hypothetical protein.
  
     0.701
Mnod_4668
KEGG: met:M446_4778 hypothetical protein.
  
     0.699
Mnod_6604
KEGG: met:M446_6067 hypothetical protein.
  
     0.692
Mnod_1641
KEGG: met:M446_0456 hypothetical protein.
  
     0.690
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.