Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2342PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_0061 alpha/beta hydrolase fold. (287 aa)    
Predicted Functional Partners:
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
  
 0.825
Mnod_2341
KEGG: mex:Mext_0063 hypothetical protein.
  
    0.592
Mnod_3466
PFAM: alpha/beta hydrolase fold; KEGG: met:M446_2535 alpha/beta hydrolase fold.
  
     0.475
Mnod_2340
KEGG: met:M446_3779 hypothetical protein.
       0.469
Mnod_0010
PFAM: protein of unknown function DUF29; KEGG: mrd:Mrad2831_1125 hypothetical protein.
    
  0.460
Mnod_2339
TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: met:M446_4272 DNA-3-methyladenine glycosylase; Belongs to the DNA glycosylase MPG family.
 
     0.451
Mnod_0474
PFAM: PDZ/DHR/GLGF domain protein; KEGG: met:M446_1717 PDZ/DHR/GLGF domain-containing protein.
 
  
  0.450
Mnod_6498
PFAM: Animal haem peroxidase; KEGG: met:M446_5884 hypothetical protein.
 
   0.445
Mnod_1071
KEGG: met:M446_2103 FAD dependent oxidoreductase.
 
 
 0.444
Mnod_5133
PFAM: cytochrome P450; KEGG: met:M446_4522 cytochrome P450.
 
   0.439
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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