Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_2344TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: met:M446_2994 methanol/ethanol family PQQ-dependent dehydrogenase. (611 aa)    
Predicted Functional Partners:
Mnod_2345
PFAM: extracellular solute-binding protein family 3; KEGG: met:M446_2993 extracellular solute-binding protein.
 
 
 0.995
Mnod_6007
TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: met:M446_5783 formaldehyde-activating enzyme.
     
 0.918
Mnod_4915
TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: met:M446_4369 formaldehyde-activating enzyme.
     
 0.912
Mnod_5977
TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: met:M446_5752 methanol/ethanol family PQQ-dependent dehydrogenase.
  
  
 
0.907
Mnod_0421
TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: met:M446_2082 methanol/ethanol family PQQ-dependent dehydrogenase.
  
  
 
0.906
Mnod_3403
PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mpo:Mpop_3340 formaldehyde-activating enzyme (Fae).
     
 0.906
Mnod_2346
PFAM: cytochrome c class I; KEGG: met:M446_2992 cytochrome c class I.
 
 
 0.855
Mnod_5978
KEGG: met:M446_5753 hypothetical protein.
 
 
 0.831
pqqB
Coenzyme PQQ biosynthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.
 
  
 0.826
Mnod_2349
KEGG: met:M446_2989 putative cytochrome c oxidase subunit III protein.
 
   
 0.823
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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