Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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Score
Mnod_2370PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: met:M446_1326 oxidoreductase FAD/NAD(P)-binding subunit. (338 aa)    
Predicted Functional Partners:
Mnod_2371
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: met:M446_1327 short-chain dehydrogenase/reductase SDR.
 0.998
Mnod_2369
TIGRFAM: benzoate 1,2-dioxygenase, small subunit; PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: met:M446_1325 benzoate 1,2-dioxygenase, small subunit.
 
 
 0.997
Mnod_2368
TIGRFAM: benzoate 1,2-dioxygenase, large subunit; PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: met:M446_1324 benzoate 1,2-dioxygenase, large subunit.
 
 
 0.991
Mnod_2374
TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase; KEGG: met:M446_1330 muconolactone delta-isomerase.
 
  
 0.947
pyrD
Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
  
 
 0.945
Mnod_2372
TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: met:M446_1328 catechol 1,2-dioxygenase.
 
  
 0.943
Mnod_3398
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: mpo:Mpop_4001 NADH:flavin oxidoreductase/NADH oxidase.
  
 0.943
Mnod_5227
PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: met:M446_3267 respiratory-chain NADH dehydrogenase domain-containing protein.
  
 
 0.916
Mnod_1172
TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: met:M446_1811 glutamate synthase, NADH/NADPH, small subunit.
   
 0.907
Mnod_1945
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: met:M446_0317 beta-ketoacyl synthase.
  
 0.892
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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