Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_2421KEGG: xau:Xaut_2925 semialdehyde dehydrogenase NAD - binding. (276 aa)    
Predicted Functional Partners:
Mnod_2419
PFAM: type III effector Hrp-dependent outers; KEGG: pol:Bpro_0094 type III effector Hrp-dependent outers.
 
   
 0.892
Mnod_2420
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; PFAM: ribulose bisphosphate carboxylase large chain; KEGG: xau:Xaut_2924 ribulose-bisphosphate carboxylase; Belongs to the RuBisCO large chain family.
 
   
 0.892
Mnod_3436
PFAM: type III effector Hrp-dependent outers; KEGG: met:M446_1733 type III effector Hrp-dependent outers.
 
   
 0.817
Mnod_3435
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; PFAM: ribulose bisphosphate carboxylase large chain; KEGG: met:M446_1732 ribulose-bisphosphate carboxylase; Belongs to the RuBisCO large chain family.
 
   
 0.815
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
  
  
 0.795
Mnod_1853
TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: met:M446_4870 L-threonine-O-3-phosphate decarboxylase.
  
  
 0.778
hisC
TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: met:M446_5257 histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
  
  
 0.778
Mnod_1708
KEGG: met:M446_4814 phosphoribosyltransferase.
   
    0.728
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
  
  
 0.724
Mnod_2422
PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_2926 major facilitator transporter.
       0.722
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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