STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2462TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; KEGG: met:M446_4145 lambda family phage portal protein. (536 aa)    
Predicted Functional Partners:
Mnod_2463
PFAM: terminase GpA; KEGG: met:M446_4146 terminase GpA.
 
  
 0.954
Mnod_2460
PFAM: peptidase S49; KEGG: met:M446_4143 peptidase S49.
 
    0.906
Mnod_2458
KEGG: nha:Nham_2387 hypothetical protein.
 
     0.868
Mnod_2459
KEGG: rsp:RSP_2757 hypothetical protein.
 
  
 0.858
Mnod_0598
PFAM: terminase GpA; KEGG: syf:Synpcc7942_0731 putative phage terminase large subunit.
 
  
 0.805
Mnod_3858
PFAM: terminase GpA; KEGG: ecx:EcHS_A2094 phage terminase large subunit (GpA).
 
  
 0.805
Mnod_5775
PFAM: terminase GpA; KEGG: ecx:EcHS_A2094 phage terminase large subunit (GpA).
 
  
 0.805
Mnod_6670
Hypothetical protein; KEGG: mms:mma_2764 phage terminase, large subunit.
 
  
 0.796
Mnod_2464
KEGG: met:M446_4147 hypothetical protein.
  
    0.794
Mnod_2461
KEGG: met:M446_4144 hypothetical protein.
       0.783
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.