Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2542TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: met:M446_3318 HlyD family type I secretion membrane fusion protein. (446 aa)    
Predicted Functional Partners:
Mnod_2541
KEGG: met:M446_3317 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase.
 
  
 0.972
Mnod_1958
KEGG: met:M446_3820 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase.
 
 
 0.744
Mnod_0406
PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: met:M446_0092 ABC transporter related.
 
 
 0.740
Mnod_0407
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_0091 ABC transporter related.
 
 
 0.722
Mnod_6495
TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: met:M446_5878 TolC family type I secretion outer membrane protein.
  
 
 0.648
Mnod_0800
PFAM: Hemolysin-type calcium-binding region; KEGG: psb:Psyr_3823 putative hemolysin-type calcium-binding region.
 
  
 0.632
Mnod_5874
PFAM: Hemolysin-type calcium-binding region; KEGG: psb:Psyr_3823 putative hemolysin-type calcium-binding region.
 
  
 0.632
Mnod_4154
TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: met:M446_4418 RND efflux system outer membrane lipoprotein.
  
 
 0.628
Mnod_6850
PFAM: Hemolysin-type calcium-binding region; KEGG: eba:ebA7184 hypothetical protein.
 
  
 0.595
Mnod_1569
PFAM: Hemolysin-type calcium-binding region; KEGG: met:M446_3007 hemolysin-type calcium-binding region.
 
  
 0.586
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.