Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2545Hypothetical protein; KEGG: met:M446_3331 outer membrane adhesin like proteiin. (4120 aa)    
Predicted Functional Partners:
Mnod_1958
KEGG: met:M446_3820 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase.
 
  
 0.604
Mnod_0407
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_0091 ABC transporter related.
 
  
 0.572
Mnod_0406
PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: met:M446_0092 ABC transporter related.
 
  
 0.571
Mnod_1957
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: met:M446_3819 HlyD family type I secretion membrane fusion protein.
 
  
 0.547
Mnod_5388
PFAM: monooxygenase FAD-binding; KEGG: mlo:mlr2092 hypothetical protein.
  
     0.535
Mnod_6617
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rpe:RPE_3593 monooxygenase, FAD-binding protein.
  
     0.532
Mnod_0484
PFAM: Hemolysin-type calcium-binding region; glycerophosphoryl diester phosphodiesterase; metallophosphoesterase; KEGG: atc:AGR_L_909 hypothetical protein.
  
  
 0.531
Mnod_2553
PFAM: Hemolysin-type calcium-binding region; KEGG: fre:Franean1_0382 hypothetical protein.
  
     0.511
Mnod_1307
PFAM: Forkhead-associated protein; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: met:M446_0921 adenylate/guanylate cyclase.
 
    0.507
Mnod_2544
Hypothetical protein; KEGG: mex:Mext_2739 type I secretion system ATPase.
  
 
 0.490
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.