Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2553PFAM: Hemolysin-type calcium-binding region; KEGG: fre:Franean1_0382 hypothetical protein. (340 aa)    
Predicted Functional Partners:
Mnod_0556
KEGG: bid:Bind_3695 proprotein convertase P.
 
   0.605
Mnod_1958
KEGG: met:M446_3820 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase.
 
  
 0.582
Mnod_1957
TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: met:M446_3819 HlyD family type I secretion membrane fusion protein.
 
  
 0.555
Mnod_6850
PFAM: Hemolysin-type calcium-binding region; KEGG: eba:ebA7184 hypothetical protein.
  
     0.546
Mnod_0407
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_0091 ABC transporter related.
 
  
 0.537
Mnod_6876
PFAM: Hemolysin-type calcium-binding region; KEGG: ana:all0364 similar to prohormone convertase.
  
     0.535
Mnod_0484
PFAM: Hemolysin-type calcium-binding region; glycerophosphoryl diester phosphodiesterase; metallophosphoesterase; KEGG: atc:AGR_L_909 hypothetical protein.
  
  
 0.531
Mnod_1569
PFAM: Hemolysin-type calcium-binding region; KEGG: met:M446_3007 hemolysin-type calcium-binding region.
  
     0.522
Mnod_6816
PFAM: Hemolysin-type calcium-binding region; KEGG: met:M446_1701 5'-nucleotidase domain-containing protein.
  
     0.520
Mnod_7343
PFAM: Hemolysin-type calcium-binding region; KEGG: met:M446_1701 5'-nucleotidase domain-containing protein.
  
     0.514
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.