STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2575KEGG: mlo:mll6478 hypothetical protein. (506 aa)    
Predicted Functional Partners:
Mnod_2573
PFAM: TadE family protein; KEGG: mlo:mll6477 hypothetical protein.
 
     0.956
Mnod_2574
PFAM: TadE family protein; KEGG: mlo:mll6476 hypothetical protein.
       0.815
Mnod_2279
KEGG: ret:RHE_CH02422 hypothetical conserved membrane protein.
  
     0.507
Mnod_0782
KEGG: met:M446_1740 hypothetical protein.
  
     0.489
Mnod_3786
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:blr3502 hypothetical protein.
 
   
 0.429
Mnod_1170
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: met:M446_1812 glutamate synthase (ferredoxin).
     
 0.428
Mnod_5388
PFAM: monooxygenase FAD-binding; KEGG: mlo:mlr2092 hypothetical protein.
  
    0.425
Mnod_2572
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:blr3502 hypothetical protein.
 
   
 0.423
Mnod_3796
KEGG: mes:Meso_0611 hypothetical protein.
  
     0.405
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.