STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2705PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mrd:Mrad2831_0112 hypothetical protein. (85 aa)    
Predicted Functional Partners:
Mnod_0733
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
 
 
 0.838
Mnod_0393
KEGG: met:M446_2218 hypothetical protein.
  
     0.771
Mnod_1500
KEGG: met:M446_0679 hypothetical protein.
  
     0.765
Mnod_0452
KEGG: met:M446_2015 hypothetical protein.
  
     0.762
Mnod_0713
PFAM: Peptidoglycan-binding domain 1 protein; KEGG: met:M446_1122 peptidoglycan binding domain-containing protein.
  
     0.752
Mnod_4552
Porin; KEGG: met:M446_3063 porin.
 
     0.750
Mnod_4668
KEGG: met:M446_4778 hypothetical protein.
  
     0.747
Mnod_1641
KEGG: met:M446_0456 hypothetical protein.
  
     0.745
Mnod_5904
KEGG: met:M446_5306 hypothetical protein.
  
     0.738
Mnod_4174
PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: met:M446_4439 peptidase S1 and S6 chymotrypsin/Hap.
  
     0.734
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.