Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Mnod_2732KEGG: met:M446_6113 hypothetical protein. (218 aa)    
Predicted Functional Partners:
Mnod_2731
PFAM: purine or other phosphorylase family 1; KEGG: met:M446_1269 purine phosphorylase family 1.
       0.603
Mnod_2730
Methyltransferase type 12; PFAM: thiopurine S-methyltransferase; Methyltransferase type 12; KEGG: nha:Nham_4629 hypothetical protein.
       0.595
Mnod_3492
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: mrd:Mrad2831_1496 phosphonate ABC transporter, periplasmic phosphonate-binding protein.
  
    0.561
Mnod_4202
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter, periplasmic phosphonate binding protein; KEGG: met:M446_2919 phosphonate ABC transporter, periplasmic phosphonate binding protein.
  
    0.561
Mnod_2733
KEGG: met:M446_6738 hypothetical protein.
       0.465
Mnod_2729
Hypothetical protein.
       0.432
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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