Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_2746PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rpb:RPB_0310 alginate O-acetyltransferase AlgJ. (461 aa)    
Predicted Functional Partners:
Mnod_4600
PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: met:M446_4192 membrane bound O-acyl transferase MBOAT family protein; Belongs to the membrane-bound acyltransferase family.
  
  
  0.949
Mnod_1561
PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: met:M446_0605 membrane bound O-acyl transferase MBOAT family protein; Belongs to the membrane-bound acyltransferase family.
  
  
  0.948
Mnod_1108
KEGG: met:M446_2137 hypothetical protein.
 
 
 
0.936
Mnod_0156
KEGG: met:M446_4603 hypothetical protein.
 
 
 
0.934
Mnod_0089
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: met:M446_0534 adenylate/guanylate cyclase.
   
 
 0.796
Mnod_0096
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: met:M446_0534 adenylate/guanylate cyclase.
   
 
 0.796
Mnod_3450
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: met:M446_2813 TPR repeat-containing adenylate/guanylate cyclase.
   
 
 0.796
Mnod_6504
TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: met:M446_5887 protease Do; Belongs to the peptidase S1C family.
  
 
 0.755
Mnod_4732
PFAM: Peptidase M23; KEGG: met:M446_4222 peptidase M23B.
   
   0.636
Mnod_3499
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: mlo:mll2209 hypothetical protein.
  
 
 0.548
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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