STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2803PFAM: type IV pilus assembly PilZ; KEGG: met:M446_2410 type IV pilus assembly PilZ. (131 aa)    
Predicted Functional Partners:
Mnod_4704
KEGG: met:M446_4188 hypothetical protein.
  
     0.710
Mnod_0717
KEGG: met:M446_1118 hypothetical protein.
  
     0.707
Mnod_2804
KEGG: met:M446_2409 hypothetical protein.
       0.701
Mnod_5127
PFAM: type IV pilus assembly PilZ; KEGG: met:M446_3234 type IV pilus assembly PilZ.
  
     0.690
Mnod_4551
KEGG: met:M446_3065 porin opacity type.
  
     0.672
Mnod_4716
KEGG: met:M446_4201 hypothetical protein.
  
     0.663
Mnod_2823
KEGG: met:M446_2388 hypothetical protein.
  
     0.657
Mnod_4163
PFAM: type IV pilus assembly PilZ; KEGG: met:M446_4427 type IV pilus assembly PilZ.
  
     0.656
Mnod_1629
KEGG: met:M446_0471 hypothetical protein.
  
     0.637
Mnod_4550
Porin; PFAM: porin; KEGG: met:M446_3066 porin opacity type.
  
     0.633
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.