STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
Mnod_2841PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: met:M446_2370 acyl-CoA dehydrogenase domain-containing protein. (592 aa)    
Predicted Functional Partners:
Mnod_6456
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: atc:AGR_C_2617 enoyl-CoA hydratase.
  
 0.949
Mnod_2080
PFAM: AMP-dependent synthetase and ligase; KEGG: met:M446_2689 AMP-dependent synthetase and ligase.
 
 
  0.925
Mnod_4392
PFAM: AMP-dependent synthetase and ligase; KEGG: met:M446_2733 AMP-dependent synthetase and ligase.
 
 
  0.923
Mnod_5238
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: met:M446_3278 acyl-CoA dehydrogenase domain-containing protein.
  
  
 
0.907
Mnod_5242
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: met:M446_3281 3-hydroxyacyl-CoA dehydrogenase NAD-binding.
 
 0.897
Mnod_2840
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: met:M446_2371 enoyl-CoA hydratase/isomerase.
 
 0.876
Mnod_3360
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: xau:Xaut_0906 3-hydroxyacyl-CoA dehydrogenase NAD-binding.
  
 0.848
Mnod_5442
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: met:M446_0234 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.848
Mnod_2839
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: met:M446_2372 short-chain dehydrogenase/reductase SDR.
  
  0.779
Mnod_0461
PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; KEGG: met:M446_2006 electron transfer flavoprotein alpha subunit.
 
 
 0.747
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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