Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene co-occurrence
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Score
Mnod_2844Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_2367 LysR family transcriptional regulator. (300 aa)    
Predicted Functional Partners:
Mnod_2843
TIGRFAM: flavoprotein WrbA; PFAM: NADPH-dependent FMN reductase; flavodoxin/nitric oxide synthase; KEGG: met:M446_2368 flavoprotein WrbA.
       0.727
Mnod_5143
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_4511 LysR family transcriptional regulator.
  
     0.666
Mnod_3454
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01817 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
  
     0.617
Mnod_3485
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_B1909 transcriptional regulator, LysR-family.
  
     0.518
Mnod_3431
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_1729 LysR family transcriptional regulator.
  
     0.503
Mnod_3219
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_4750 transcriptional regulator, LysR family.
  
     0.402
Mnod_0279
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: met:M446_2331 LysR family transcriptional regulator.
  
     0.401
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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