STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2873PFAM: glycoside hydrolase 15-related; KEGG: met:M446_3739 glycoside hydrolase 15-related. (608 aa)    
Predicted Functional Partners:
Mnod_7551
PFAM: glycosyl transferase family 20; KEGG: met:M446_6822 alpha,alpha-trehalose-phosphate synthase (UDP-forming).
 
   
 0.848
Mnod_0220
HAD-superfamily hydrolase, subfamily IIB; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
   
 0.834
Mnod_2874
TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: met:M446_3738 transketolase; Belongs to the transketolase family.
     
 0.803
Mnod_7546
KEGG: met:M446_6807 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: aminoglycoside phosphotransferase; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
   
 0.777
Mnod_7548
KEGG: met:M446_6809 malto-oligosyltrehalose synthase; TIGRFAM: 4-alpha-glucanotransferase; malto-oligosyltrehalose synthase; PFAM: glycoside hydrolase family 77; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
   
 0.722
Mnod_2872
KEGG: met:M446_3740 hypothetical protein.
       0.603
glgE
Alpha amylase catalytic region; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
 
   
 0.554
Mnod_7549
KEGG: met:M446_6810 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
  
 0.538
Mnod_4604
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: met:M446_2621 alpha amylase catalytic region.
 
   
 0.518
Mnod_7236
PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: met:M446_6486 major facilitator transporter.
 
     0.508
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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