STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2876PFAM: glycosyl transferase family 2; KEGG: amc:MADE_00970 hypothetical protein. (294 aa)    
Predicted Functional Partners:
Mnod_0494
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: met:M446_1684 endonuclease/exonuclease/phosphatase.
 
     0.651
Mnod_5211
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: met:M446_2955 undecaprenyl-phosphate glucose phosphotransferase.
  
  
 0.557
Mnod_2877
PFAM: acriflavin resistance protein; KEGG: met:M446_3709 acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.531
Mnod_2750
KEGG: nar:Saro_3231 hypothetical protein.
 
     0.524
Mnod_2875
TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: met:M446_3737 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase.
       0.507
Mnod_2744
KEGG: mmr:Mmar10_2480 hypothetical protein.
  
     0.485
Mnod_7154
KEGG: met:M446_6339 hopanoid biosynthesis associated radical SAM protein HpnJ; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB.
 
     0.465
Mnod_0875
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; KEGG: met:M446_5186 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
  
 0.440
Mnod_1185
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; KEGG: met:M446_5186 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
  
 0.440
Mnod_5608
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein; KEGG: rpe:RPE_3497 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
  
  
 0.440
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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