Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Mnod_2964PFAM: transposase IS4 family protein; KEGG: rpe:RPE_1141 transposase, mutator type. (468 aa)    
Predicted Functional Partners:
Mnod_0308
PFAM: transposase IS4 family protein; KEGG: xau:Xaut_4843 transposase IS4 family protein.
  
     0.742
Mnod_0645
PFAM: transposase IS4 family protein; KEGG: xau:Xaut_4843 transposase IS4 family protein.
  
     0.742
Mnod_0788
PFAM: transposase IS4 family protein; KEGG: xau:Xaut_4843 transposase IS4 family protein.
  
     0.742
Mnod_0903
PFAM: transposase IS4 family protein; KEGG: xau:Xaut_4843 transposase IS4 family protein.
  
     0.742
Mnod_2029
PFAM: transposase IS4 family protein; KEGG: xau:Xaut_4843 transposase IS4 family protein.
  
     0.742
Mnod_2233
PFAM: transposase IS4 family protein; KEGG: xau:Xaut_4843 transposase IS4 family protein.
  
     0.742
Mnod_2688
PFAM: transposase IS4 family protein; KEGG: xau:Xaut_4843 transposase IS4 family protein.
  
     0.742
Mnod_3217
PFAM: transposase IS4 family protein; KEGG: xau:Xaut_4843 transposase IS4 family protein.
  
     0.742
Mnod_6465
PFAM: transposase IS4 family protein; KEGG: xau:Xaut_4843 transposase IS4 family protein.
  
     0.742
Mnod_6804
PFAM: transposase IS4 family protein; KEGG: xau:Xaut_4843 transposase IS4 family protein.
  
     0.742
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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