STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Mnod_2966Transposase; KEGG: gbe:GbCGDNIH1_1045 transposase. (120 aa)    
Predicted Functional Partners:
Mnod_2341
KEGG: mex:Mext_0063 hypothetical protein.
  
     0.521
Mnod_5006
Transposase mutator type; Required for the transposition of the insertion element.
 
     0.485
Mnod_7603
KEGG: mrd:Mrad2831_6371 hypothetical protein.
  
     0.483
Mnod_5010
Transposase; KEGG: met:M446_5531 transposase.
  
     0.461
Mnod_6082
KEGG: met:M446_5360 hypothetical protein.
  
     0.460
Mnod_4503
KEGG: met:M446_4569 phosphoenolpyruvate carboxylase; Belongs to the PEPCase type 1 family.
  
     0.459
Mnod_5016
Hypothetical protein; KEGG: mex:Mext_0481 integrase catalytic region.
  
    0.453
Mnod_2965
PFAM: 2-nitropropane dioxygenase NPD; KEGG: hypothetical protein.
       0.438
Mnod_4327
KEGG: oan:Oant_0704 integrase catalytic region.
  
     0.423
Mnod_0853
KEGG: met:M446_5532 hypothetical protein.
  
     0.405
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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