Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Mnod_2985PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_0770 binding-protein-dependent transport systems inner membrane component. (273 aa)    
Predicted Functional Partners:
Mnod_2984
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_0771 ABC transporter related.
 
 
 0.967
Mnod_2986
PFAM: NMT1/THI5 like domain protein; KEGG: met:M446_0769 NMT1/THI5-like domain-containing protein.
 
 
 0.932
Mnod_3418
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_3092 ABC transporter related.
 
 
 0.866
Mnod_4887
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_3458 ABC transporter related.
 
 
 0.840
Mnod_5145
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_4509 ABC transporter related.
 
 
 0.839
Mnod_2257
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: reh:H16_A2382 ABC-type transporter, ATPase component: NitT family.
 
 
 0.832
Mnod_0327
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_2275 ABC transporter related.
 
 
 0.830
Mnod_1055
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_1433 ABC transporter related.
 
 
 0.815
Mnod_0056
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_0056 ABC transporter related.
 
 
 0.809
Mnod_4894
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_3456 ABC transporter related.
 
 0.796
Your Current Organism:
Methylobacterium nodulans
NCBI taxonomy Id: 460265
Other names: M. nodulans ORS 2060, Methylobacterium nodulans ORS 2060, Methylobacterium nodulans str. ORS 2060, Methylobacterium nodulans strain ORS 2060
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